Explanation in Neuroscience

Many of us consider it uncontroversial that information processing is a natural function of the brain. Since functions in biology are only won through empirical investigation, there should be a significant body of unambiguous evidence that supports this functional claim. Before we can interpret the evidence, however, we must ask what it means for a biological system to process information. Although a concept of information is generally accepted in the neurosciences without critique, in other biological sciences applications of information, despite (...) careful analysis, remain controversial. In this work I will review classical stimulus-response studies in neuroscience and use Claude Shannon’s mathematical information theory as a starting point to interpret information processing as a function of the brain. I will illustrate a disanalogy between Shannon’s communication model (source, encode, channel, receiver, decode) and neural systems, and will argue that the neural code is not very code-like in comparison to genetic and engineered codes. I suggest that we have conflated the act of representing neuroscientific facts—which we do to summarize and communicate our findings with others—with taking experimental facts to be representations. (shrink)

Many cognitive scientists, neuroscientists, and philosophers of science consider it uncontroversial that the brain processes information. In this work we broadly consider the types of experimental evidence that would support this claim, and find that although physical features of specific brain areas selectively covary with external stimuli or abilities, there is no direct evidence supporting an information processing function of any particular brain area.

Functional robustness refers to a system’s ability to maintain a function in the face of perturbations to the causal structures that support performance of that function. Modularity, a crucial element of standard methods of causal inference and difference-making accounts of causation, refers to the independent manipulability of causal relationships within a system. Functional robustness appears to be at odds with modularity. If a function is maintained despite manipulation of some causal structure that supports that function, then the relationship between that (...) structure and function fails to be manipulable independent of other causal relationships within the system. Contrary to this line of reasoning, I argue that functional robustness often attends feedback control, rather than failures of modularity. Feedback control poses its own challenges to causal explanation and inference, but those challenges do not undermine modularity—and indeed, modularity is crucial to grappling with them. (shrink)

The traditional approach to explanation in cognitive neuroscience is realist about psychological constructs, and treats them as explanatory. On the “standard framework,” cognitive neuroscientists explain behavior as the result of the instantiation of psychological functions in brain activity. This strategy is questioned by results suggesting the distribution of function in the brain, the multifunctionality of individual parts of the brain, and the overlap in neural realization of purportedly distinct psychological constructs. One response to this in the field has been to (...) employ the tools of databasing and machine learning to attempt to find and quantify specific correlations between psychological kinds such as ‘memory’ or ‘attention’ (or sub-kinds thereof) and patterns of activity in the brain. I assess the status and prospects of these projects. I argue that current proponents of the project are vague about their aims, vis-à-vis the standard framework, sometimes suggesting substantiation of the framework, sometimes suggesting retaining the framework but revising the ontology of mental constructs, and sometimes suggesting abandonment of the framework. I argue that extant results from within the projects fail to substantiate the standard framework, and propose an alternative. On my view, psychological constructs should not be viewed as explanantia, but instead as heuristic concepts that help us uncover ways that behaviors can vary and the ways that the brain implements those distinctions. I then discuss the normative upshot of these views for databasing and brain mapping projects. (shrink)

At its core this book is concerned with logic and computation with respect to the mathematical characterization of sentient biophysical structure and its behavior. -/- Three related theories are presented: The first of these provides an explanation of how sentient individuals come to be in the world. The second describes how these individuals operate. And the third proposes a method for reasoning about the behavior of individuals in groups. -/- These theories are based upon a new explanation of experience in (...) nature, the construction of senses, and motile behavior. This new approach is developed from first principles to enable a rigorous and systematic explanation of the variety of associated intelligent behaviors. -/- Alongside this development is a further account that focuses upon the nature of our work. It discusses the existential aspects of scientific inquiry, its epistemology and logic. It seeks to clarify the nature of the mathematical characterization and computation of natural behaviors, dealing with questions in the foundations of logic. It explores methodological issues related to reduction and the refinement of ideas from intuition to formal logical structure. -/- In support of this inquiry we work toward the development of a calculus for biophysical construction and its dynamics. If successful this mechanics mathematically characterizes sensory and motile behavior. -/- Upon this foundation we propose a model of apprehension and explore how its products are processed by the organism. Finally, we develop a probabilistic theory that enables us to reason about inaccessible factors in group behavior. -/- The mechanics we propose suggests the design and physical realization of a new model of computation; one in which structure and the concurrency of action are a first-order consideration. -/- We identify opportunities for experimental verification of the theory and we suggest a proof of our results in practice by the identification of this mechanism, allowing the construction of machines that experience. (shrink)

According to a standard view in psychology and neuroscience, there are multiple memory systems in the brain. Philosophers and scientists of memory rely on the idea that there are multiple memory systems in the brain to infer that procedural memory is not a cognitive form of memory. As a result, memory is considered to be a disunified capacity. In this paper, I evaluate two criteria used by Michaelian to demarcate between cognitive and non-cognitive memory systems: appeal to stored content and (...) retrieval flexibility. By considering several empirical cases I argue that the criteria offered ultimately fail to distinguish between memory systems. The procedural memory the system is neither contentless nor inflexible. (shrink)

According to mainstream philosophical views causal explanation in biology and neuroscience is mechanistic. As the term ‘mechanism’ gets regular use in these fields it is unsurprising that philosophers consider it important to scientific explanation. What is surprising is that they consider it the only causal term of importance. This paper provides an analysis of a new causal concept—it examines the cascade concept in science and the causal structure it refers to. I argue that this concept is importantly different from the (...) notion of mechanism and that this difference matters for our understanding of causation and explanation in science. (shrink)

Deep learning (DL) is a statistical technique for pattern classification through which AI researchers train artificial neural networks containing multiple layers that process massive amounts of data. I present a three-level account of explanation that can be reasonably expected from DL models in cognitive neuroscience and that illustrates the explanatory dynamics within a future-biased research program (Feest Philosophy of Science 84:1165–1176, 2017 ; Doerig et al. Nature Reviews: Neuroscience 24:431–450, 2023 ). By relying on the mechanistic framework (Craver Explaining the (...) brain: Mechanisms and the mosaic unity of neuroscience. Clarendon, 2007 ; Stinson Eppuor si muove: Doing history and philosophy of Science with Peter Machamer. Springer, 2017, The Routledge Handbook of the computational mind. Routledge, 2018 ), I develop an account that corresponds to the stages of mechanism discovery, i.e., our shifting epistemic position and epistemic goals, and propose a representative model for each level. Generic, theoretical DL models at _Level 1_ address the general features of a cognitive phenomenon through exploration and provide us with how-possibly explanations. On the other hand, DL models at _Level 2_ either identify the interaction between the features or represent the epistemic stage when the researcher is still unsure if the modeled features are crucial or arbitrary. These models should provide us with how-plausibly explanations. Finally, specific DL models of specific brain areas, i.e., ersatz models filled with relevant cognitive and neuroscientific details, are at _Level 3_. At this level, a researcher can advance how-actually explanations of cognitive phenomena. The main strength of this account is that it elucidates both _global explanatory dynamics_ and _local explanatory dynamics_ (cf. Dresow Synthese 199:10441–10474, 2021 ). The former occurs when the transition between levels happens in accordance with the process of obtaining more details about a particular cognitive phenomenon through multiple DL models. The latter, meanwhile, involves cases in which the transition between levels takes place within a single DL model by elucidating internal mechanisms (e.g., using Explainable AI techniques for rendering models more transparent). (shrink)

The topic of mechanistic explanation in neuroscience has been a subject of recent discussion. There is a lot of interest in understanding what these explanations involve. Furthermore, there is disagreement about whether neurological mechanisms themselves should be viewed as reductionist in nature. In this paper I will explain how these two issues are related. I will, first, describe how mechanisms support a form of antireductionism. This is because the mechanisms that exist should be seen as involving part-whole relations, where the (...) behavior of a whole is more than the sum of its parts. After this, I will consider mechanistic explanations and how they can be understood. While some people think the explanations concern existing entities in the world, I will argue that we can understand the explanations by viewing them in terms of arguments. Despite the fact that it is possible to understand mechanistic explanations in this manner, the antireductionist point remains. (shrink)

This paper considers the question of whether the influential distinction between levels of explanation introduced by David Marr can be used as a general framework for contemplating levels of explanation in cognitive sciences. Marr introduced three levels at which we can explain cognitive processes: the computational, algorithmic, and implementational levels. Some argue that Marr’s levels of explanation can only be applied to modular cognitive systems. However, since many psychological processes are non-modular, it seems that Marr’s levels of explanation cannot explain (...) such psychological processes. To show that the latter claim is not convincing, the paper draws upon an influential paradigm from cognitive sciences that is based on the principle of free energy. Based on this paradigm, the paper argues that even non-modular psychological processes can be computationally analyzed and algorithmically implemented. The conclusion of the paper is that, at least under the assumption that the func- tion of the mind is to minimize free energy, Marr’s levels of explanation can be successfully used as a general framework for understanding psychological processes at different levels of description. (shrink)

Trauma and traumatization have arguably always been part of the human experience yet have in the last few decades come to occupy a prominent place in various popular and academic contexts. This chapter offers an interdisciplinary and comparative investigation of trauma and traumatization in different historical contexts. More specifically, my aim is to discuss whether the rich bodies of research in trauma and traumatization in Holocaust survivors and their descendants yield relevant insights for post-slavery contexts. It has been shown that (...) children of Holocaust survivors suffer from stress and other symptoms related to their parents’ traumatization which influence the interactions with their environments. Such results made me wonder whether the traumatic impact of chattel slavery—which has been abolished some 160 years ago—might have a similar impact, yet now across several generations. Issues of the transmission and current persistence of trauma are inherently linked to questions of social justice, recognition and reparations. This chapter is meant, however, as an exploration of interdisciplinary connections that should be studied in concert to account for the traumatic impact of historical and present day experiences. It starts by discussing the concepts of trauma and post-traumatic stress disorder. Continuing by exploring the phenomenon of the inter- and transgenerational transmission of trauma, it relies in part on the important body of research conducted on families of Holocaust survivors. I then turn to the much less researched ‘post-traumatic slave syndrome’ (DeGruy) and discuss two factors that might contribute to the transgenerational transmission of trauma in the families of former enslaved: epigenetics and the continuation of traumatization even after the abolition of slavery as articulated in Historical Trauma theory. Drawing upon these insights, I conclude that it is plausible that a continuing transgenerational transmission of trauma might occur in some families of slavery survivors, the knowledge of which might help to break the chains of such traumatization across generations. (shrink)

We provide three innovations to recent debates about whether topological or “network” explanations are a species of mechanistic explanation. First, we more precisely characterize the requirement that all topological explanations are mechanistic explanations and show scientific practice to belie such a requirement. Second, we provide an account that unifies mechanistic and non-mechanistic topological explanations, thereby enriching both the mechanist and autonomist programs by highlighting when and where topological explanations are mechanistic. Third, we defend this view against some powerful mechanist objections. (...) We conclude from this that topological explanations are autonomous from their mechanistic counterparts. (shrink)

The relationship between topological explanation and mechanistic explanation is unclear. Most philosophers agree that at least some topological explanations are mechanistic explanations. The crucial question is how to make sense of this claim. Zednik (Philos Psychol 32(1):23–51, 2019) argues that topological explanations are mechanistic if they (i) describe mechanism sketches that (ii) pick out organizational properties of mechanisms. While we agree with Zednik’s conclusion, we critically discuss Zednik’s account and show that it fails as a general account of how and (...) when topological explanations are mechanistic. First, if topological explanations were just mechanism sketches, this implies that they could be enriched by replacing topological terms with mechanistic detail. This, however, conflicts how topological explanations are used in scientific practice. Second, Zednik’s account fails to show how topological properties can be organizational properties of mechanisms that have a place in mechanistic explanation. The core issue is that Zednik’s account ignores that topological properties often are _global_ properties while mechanistic explanantia refer to _local_ properties. We demonstrate how these problems can be solved by a recent account of mechanistic completeness (Craver and Kaplan in Br J Philos Sci 71(1):287–319, 2020; Kohár and Krickel in Calzavarini and Viola (eds) Neural mechanisms—new challenges in the philosophy of neuroscience, Springer, New York, 2021) and use a multilayer network model of Alzheimer’s Disease to illustrate this. (shrink)

Levenstein et al. aptly highlight some of the foundational issues in theoretical neuroscience, such as the role of abstraction and idealization in providing scientific explanations and understanding, and distinguishing under which conditions neuroscientific models provide genuine explanations, or mere descriptions, predictions, or control. -/- The authors rightly emphasize that philosophers of science can also gain valuable insights from the vast body of neuroscience literature, by employing methods of digital humanities, such as text mining, in line with the cognitive metascience approach (...) (Miłkowski, 2023). -/- Conversely, neuroscientists can benefit from the latest research in philosophy of science, particularly on the epistemic norms of diverse kinds of explanations in neuroscience, e.g., topological (Kostić, 2020), computational (Miłkowski, 2013; Chirimuuta, 2018), dynamical (Favela, 2020), and functional (Egan, 2017). Understanding the diverse goals of theories is conducive to fruitful exploratory and explanatory scientific practice. Some forms of scientific understanding are not always grounded in explanations, but also in diverse theoretical representations, e.g., diagrams, taxonomies, and diagnostic manuals (Miłkowski, 2023). Philosophical theories of understanding can also integrate different kinds of explanations in a single framework (Khalifa et al., 2022). -/- The need for these interdisciplinary connections is particularly vivid in the case of network models that are increasingly being used in neuroscience (Kostić et al., 2020), and especially when it comes to evaluating their explanatory power (Kostić, 2020; Kostić and Khalifa, 2023). -/- In conclusion, we strongly support Levenstein et al.'s call for greater collaboration between philosophers of science and neuroscientists on the foundational issues in neuroscience. Embracing this interdisciplinary approach is essential for advancing our knowledge of the brain and its function. (shrink)

Changes in synaptic strength are described as a unifying hypothesis for memory formation and storage, leading philosophers to consider the ‘synaptic efficacy hypothesis’ as a paradigmatic explanation in neuroscience. Craver’s mosaic view has been influential in understanding synaptic efficacy by presenting long-term potentiation as a multi-level mechanism nested within a multi-level structure. This paper argues that the mosaic view fails to fully capture the explanatory power of the synaptic efficacy hypothesis due to assumptions about multi-level mechanisms. I present an alternative (...) approach that emphasizes the explanatory function of unification, accounting for the widespread consensus in neuroscience regarding synaptic efficacy by highlighting the stability of synaptic causal variables across different multi-level mechanisms. (shrink)

Millikan’s (1984. Language, Thought, and Other Biological Categories: New Foundations for Realism. MIT Press) selected effects theory of functions states that functions are effects for which the ancestors of a trait were selected for. As the function is an effect a thing’s ancestors produced, only things that are reproductions in some sense can have functions. Against this reproduction requirement, Garson (2019. What Biological Functions Are and Why They Matter. Cambridge University Press) argues that not only processes of differential reproduction but (...) also processes of differential persistence can lead to new functions. Since such “persistence functions” have the same explanatory power as traditional selected effects functions, selected effects theorists should include them in their theory. In this paper, I will defend Millikan’s theory against this argument. I will show that the proponents of the generalized theory have yet to provide a working notion of populations that avoids a liberality problem. Further, I will argue that persistence functions are at best a marginal case of functions due to their restricted explanatory power. (shrink)

Some New Mechanists have proposed that claims of compositional relations are justified by combining the results of top-down and bottom-up interlevel interventions. But what do scientists do when they can perform, say, a cellular intervention, but not a subcellular detection? In such cases, paired interlevel interventions are unavailable. We propose that scientists use abduction and we illustrate its use through a case study of the ionic theory of resting and action potentials.

Despite the huge and constant progress in the molecular and cellular neuroscience fields, our capability to understand brain alterations and treat mental illness is still limited. Therefore, a paradigm shift able to overcome such limitation is warranted. Behavior and the associated mental states are the interface between the central nervous system and the living environment. Since, in any system, the interface is a key regulator of system organization, behavior is proposed here as a unique and privileged level of control and (...) orchestration of brain structure and activity. This view has relevant scientific and clinical implications. First, the study of behavior represents a singular starting point for the investigation of neural activity in an integrated and comprehensive fashion. Second, behavioral changes, accomplished through psychotherapy or environmental interventions, are expected to have the highest impact to specifically reorganize the complexity of the human mind and thus achieve a solid and long-lasting improvement in mental health. (shrink)

Neuroclassicism is the view that cognition is explained by “classical” computing mechanisms in the nervous system that exhibit a clear demarcation between processing machinery and read–write memory. The psychologist C. R. Gallistel has mounted a sophisticated defense of neuroclassicism by drawing from ethology and computability theory to argue that animal brains necessarily contain read–write memory mechanisms. This argument threatens to undermine the “connectionist” orthodoxy in contemporary neuroscience, which does not seem to recognize any such mechanisms. In this paper I argue (...) that the neuroclassicist critique rests on a misunderstanding of how computability theory constrains theorizing about natural computing mechanisms. (shrink)

In this paper, I suggest that some tales (or narratives) developed in the literature of embodied and radical embodied cognitive science can contribute to the solution of two longstanding issues in the cognitive neuroscience of perception and action. The two issues are (i) the fundamental problem of perception, or how to bridge the gap between sensations and the environment, and (ii) the fundamental problem of motor control, or how to better characterize the relationship between brain activity and behavior. In both (...) cases, I am going to propose that cognitive neuroscience could incorporate embodied insights—coming from the sensorimotor approach to perception and action, and from ecological psychology—to advance the solution for each issue without the need for abandoning or undergoing a substantial revision of its core assumptions. Namely, cognitive neuroscience could incorporate the forgotten tales of embodiment without undergoing through a complete revolution. In this sense, I am proposing not a call but a farewell to arms. (shrink)

Neuroscientists have in recent years turned to building models that aim to generate predictions rather than explanations. This “predictive turn” has swept across domains including law, marketing, and neuropsychiatry. Yet the norms of prediction remain undertheorized relative to those of explanation. I examine two styles of predictive modeling and show how they exemplify the normative dynamics at work in prediction. I propose an account of how predictive models, conceived of as technological devices for aiding decision-making, can come to be adequate (...) for purposes that are defined by both their guiding research questions and their larger social context of application. (shrink)

The authors argue that their target is orthogonal to the realism and instrumentalist debate. I argue that it is born directly from it. While the distinction is helpful in illuminating how some ontological commitments demand a theory of implementation, it's less clear whether different views cleanly map onto the epistemic and metaphysical uses defined in the paper.

William James wrote that the life of religion “consists of the belief that there is an unseen order, and that our supreme good lies in harmoniously adjusting ourselves thereto.” Naturalism organizes our experiences of the universe within a science-grounded philosophical and/or religious framework aligning it with what is supremely good for our lives. This article describes a science-grounded specific “Framework of Spirituality” identifying part of this unseen order that opens a “spiritual core” within persons as a source of healing and (...) happiness. A cognitive behavioral therapy (CBT) expanded process shows how experiences of human worth and dignity are keys to this new awareness and provides speculation for a brain function and evolutionary explanation. Details of this knowledge are related to various perspectives and authors of naturalism—scientific, religious, ecstatic, and ecological—to contribute to a future direction for the understanding, development, and further expression of naturalism. (shrink)

Over the last 30 years, representationalist and dynamicist positions in the philosophy of cognitive science have argued over whether neurocognitive processes should be viewed as representational or not. Major scientific and technological developments over the years have furnished both parties with ever more sophisticated conceptual weaponry. In recent years, an enactive generalization of predictive processing – known as active inference – has been proposed as a unifying theory of brain functions. Since then, active inference has fueled both representationalist and dynamicist (...) campaigns. However, we believe that when diving into the formal details of active inference, one should be able to find a solution to the war; if not a peace treaty, surely an armistice of a sort. Based on an analysis of these formal details, this paper shows how both representationalist and dynamicist sensibilities can peacefully coexist within the new territory of active inference. (shrink)

I propose a dynamic causal approach to characterizing the notion of a mechanism. Levy and Bechtel, among others, have pointed out several critical limitations of the new mechanical philosophy, and pointed in a new direction to extend this philosophy. Nevertheless, they have not fully fleshed out what that extended philosophy would look like. Based on a closer look at neuroscientific practice, I propose that a mechanism is a dynamic causal system that involves various components interacting, typically nonlinearly, with one another (...) to produce a phenomenon of interest. (shrink)

Neuroscientists are searching for the engram within the conceptual framework established by John Locke's theory of mind. This framework was elaborated before the development of information theory, before the development of information processing machines and the science of computation, before the discovery that molecules carry hereditary information, before the discovery of the codon code and the molecular machinery for editing the messages written in this code and translating it into transcription factors that mark abstract features of organic structure such as (...) anterior and distal. The search for the engram needs to abandon Locke's conceptual framework and work within a framework informed by these developments. The engram is the medium by which information extracted from past experience is transmitted to the computations that inform future behavior. The information-conveying symbols in the engram are rapidly generated in the course of computations, which implies that they are molecules. (shrink)

Causal reductionism is the widespread assumption that there is no room for additional causes once we have accounted for all elementary mechanisms within a system. Due to its intuitive appeal, causal reductionism is prevalent in neuroscience: once all neurons have been caused to fire or not to fire, it seems that causally there is nothing left to be accounted for. Here, we argue that these reductionist intuitions are based on an implicit, unexamined notion of causation that conflates causation with prediction. (...) By means of a simple model organism, we demonstrate that causal reductionism cannot provide a complete and coherent account of ‘what caused what’. To that end, we outline an explicit, operational approach to analyzing causal structures. (shrink)

Proponents of ontic conceptions of explanation require all explanations to be backed by causal, constitutive, or similar relations. Among their justifications is that only ontic conceptions can do justice to the ‘directionality’ of explanation, i.e., the requirement that if X explains Y , then not-Y does not explain not-X . Using topological explanations as an illustration, we argue that non-ontic conceptions of explanation have ample resources for securing the directionality of explanations. The different ways in which neuroscientists rely on multiplexes (...) involving both functional and anatomical connectivity in their topological explanations vividly illustrate why ontic considerations are frequently (if not always) irrelevant to explanatory directionality. Therefore, directionality poses no problem to non-ontic conceptions of explanation. (shrink)

This chapter will be a brief survey of the concepts from general philosophy of science for those interested in cognitive science. It covers several major topics in the philosophy of science: scientific explanation and underdetermination, reductionism and levels of nature, and scientific realism. We will discuss the goals of science, the methods of science, and the most plausible interpretations of science. To demonstrate the importance of these topics, the chapter includes cases in which confusion over these issues has led scientists (...) astray. These cases include instances in which cognitive neuroscience has failed to discover adequate explanations for phenomena, when previously established research did not withstand further scrutiny, and the increasingly complex and bewildering interrelationship between the study of the mind and the study of the brain and its parts. These issues are common to many areas of science, but they can be particularly fraught in a field like cognitive neuroscience, as researchers from a wide variety of disciplinary backgrounds and research foci come together to develop a systematic understanding of the mind. (shrink)

In this Handbook entry, I review how colour similarity spaces are constructed, first for physical sources of colour and secondly for colour as it is perceptually experienced. The unique hues are features of one of the latter constructions, due initially to Hering and formalized in the Swedish Natural Colour System. I review the evidence for a physiological basis for the unique hues. Finally, I argue that Tye's realist approach to the unique hues is a mistake.

Debate on the nature of representation in cognitive systems tends to oscillate between robustly realist views and various anti‐realist options. I defend an alternative view, deflationary realism, which sees cognitive representation as an offshoot of the extended application to cognitive systems of an explanatory model whose primary domain is public representation use. This extended application, justified by a common explanatory target, embodies idealisations, partial mismatches between model and reality. By seeing representation as part of an idealised model, deflationary realism avoids (...) the problems with robust realist views, while keeping allegiance to realism. (shrink)

The discovery of the engram, the physical substrate of memory, is a central challenge for the sciences of memory. Following the application of optogenetics to the neurobiological study of memory, scientists and philosophers claim that the engram has been found. In this paper, I evaluate the implications of applying optogenetic tools to the localization of the engram. I argue that conceptions of engram localization need to be revised to be made consistent with optogenetic studies of the engram. I distinguish between (...) challenges to vehicle and content localization. First, I consider the silent engram hypothesis. According to this hypothesis, optogenetic studies indicate that synaptic efficacy, the traditional engram-bearing vehicle, is important merely for retrieval. I argue that this interpretation rests upon a misunderstanding of accessibility. Second, I argue that optogenetic-based strategies and findings conflict with preservationist and constructivist views on memory storage. There is an enduring trace, but stored content may change over time and experience, resulting in doubt about what constitutes a single engram. (shrink)

Optogenetics and DREADDs (Designer Receptors Exclusively Activated by Designer Drugs) are important research tools in recent neurobiology. These tools allow unprecedented control over activity in specifically targeted neurons in behaving animals. Two approaches in philosophy of neuroscience, mechanism and ruthless reductionism, provide explicit accounts of experiments and results using tools like these, but each offers a different picture about how levels of mechanisms relate. I argue here that the ruthless reductionist’s direct mind‐to‐cellular/molecular activities linkages “in a single bound” better fits (...) with both the experimental designs using these tools and some of the scientists’ own judgments about their results than does the mechanist’s “nested hierarchies of mechanisms‐within‐mechanisms.” So at least some important work in current neuroscience appears to be ruthlessly reductive. Mechanism may not correctly characterize all current work in neuroscience, despite its recent popularity. (shrink)

An estimated 15% of patients seen by neurologists have neurological symptoms, such as paralysis, tremors, dystonia, or seizures, that cannot be medically explained. For a long time, such patients were diagnosed as having conversion disorder and referred to psychiatrists, but for the last two decades or so, neurologists have started to pay more serious attention to this patient group. Instead of maintaining the commonly used label of conversion disorder – which refers to Freud’s idea that traumatic events can be converted (...) into deviant behaviour – these neurologists use the term functional neurological disorder and explain that the problems are due to abnormal central nervous system functioning. The situation that some patients with medically unexplained neurological symptoms are diagnosed with CD and treated by psychiatrists while others are diagnosed with FND and stay under the control of neurologists provides a unique case for analysing how neurological and psychological explanations affect subjectivity. In this article, I compare patient reports from English-language websites from the past 15 years to find out how minds, bodies, brains, and selves act and interact in the accounts of both patient groups. I conclude that the change in label from CD to FND has not only influenced ideas of medically unexplained disorders, but also affected ideas of the self and the body; of self-control and accountability. (shrink)

Philosophical proponents of predictive processing cast the novelty of predictive models of perception in terms of differences in the functional role and information content of neural signals. However, they fail to provide constraints on how the crucial semantic mapping from signals to their informational contents is determined. Beyond a novel interpretative gloss on neural signals, they have little new to say about the causal structure of the system, or even what statistical information is carried by the signals. That means that (...) the predictive framework for perception can be relabeled in traditional, non-predictive terms, with no empirical consequences relevant to existing or future data. To the extent that neuroscientific research based on predictive processing is both innovative and productive, it will be due to the framework’s suggestive heuristic effects, or perhaps auxiliary empirical claims about implementation, rather than a difference in the information-processing structure that it describes. (shrink)

A cognitive assessment strategy that is not limited to examining a set of summary test scores may be more helpful for early detection of emergent illness such as Alzheimer’s disease (AD) and may permit a better understanding of cognitive functions and dysfunctions in those with AD and other dementia disorders. A revisit of the work already undertaken by Kaplan and colleagues using the Boston Process-Approach provides a solid basis for identifying new opportunities to capture data on neurocognitive processes, test-taking strategies (...) and response styles. Thus, this critical review will combine traditional process-based assessment strategies with support provided or offered by newer technologies that have the potential to add value to data collection and interpretation. There is now considerable interest in neuropsychological test administration using computer/digital technology, both in research and in clinical settings. To add value, any computerized version of an existing cognitive test should respect the administration procedure for which normative data were obtained, should be time-saving in terms of scoring and interpretation, and should, we argue, facilitate gathering information about the processes and strategies followed in test completion. This article will offer an overview of the steps needed when implementing computerization of neuropsychological tests using a Process-Based Approach (PBA) to these technology-based adaptations and will discuss further developments in this area by linking it to future technological developments that may be possible in the area of neuropsychological assessment. Additionally, an overview of neuropsychological tests that may benefit from computerization will be presented, together with suggestions on the specific processes, strategies and features that may be captured with the aid of such computerization. Finally, hypotheses on how virtual reality could be an asset for the future of the PBA to neuropsychological assessment will also be discussed. (shrink)

Although there is a substantial philosophical literature on dynamical systems theory in the cognitive sciences, the same is not the case for neuroscience. This paper attempts to motivate increased discussion via a set of overlapping issues. The first aim is primarily historical and is to demonstrate that dynamical systems theory is currently experiencing a renaissance in neuroscience. Although dynamical concepts and methods are becoming increasingly popular in contemporary neuroscience, the general approach should not be viewed as something entirely new to (...) neuroscience. Instead, it is more appropriate to view the current developments as making central again approaches that facilitated some of neuroscience’s most significant early achievements, namely, the Hodgkin–Huxley and FitzHugh–Nagumo models. The second aim is primarily critical and defends a version of the “dynamical hypothesis” in neuroscience. Whereas the original version centered on defending a noncomputational and nonrepresentational account of cognition, the version I have in mind is broader and includes both cognition and the neural systems that realize it as well. In view of that, I discuss research on motor control as a paradigmatic example demonstrating that the concepts and methods of dynamical systems theory are increasingly and successfully being applied to neural systems in contemporary neuroscience. More significantly, such applications are motivating a stronger metaphysical claim, that is, understanding neural systems as being dynamical systems, which includes not requiring appeal to representations to explain or understand those phenomena. Taken together, the historical claim and the critical claim demonstrate that the dynamical hypothesis is undergoing a renaissance in contemporary neuroscience. (shrink)

Researchers in the cognitive sciences often seek neural correlates of psychological constructs. In this paper, I argue that even when these correlates are discovered, they do not always lead to reductive outcomes. To this end, I examine the psychological construct of a critical period and briefly describe research identifying its neural correlates. Although the critical period is correlated with certain neural mechanisms, this does not imply that there is a reductionist relationship between this psychological construct and its neural correlates. Instead, (...) this case study suggests that there may be many-to-many psychological-neural mappings, not just one-to-one or even one-to-many relations between psychological kinds and types of neural mechanisms. (shrink)

Over the last decades, network-based approaches have become highly popular in diverse fields of biology, including neuroscience, ecology, molecular biology and genetics. While these approaches continue to grow very rapidly, some of their conceptual and methodological aspects still require a programmatic foundation. This challenge particularly concerns the question of whether a generalized account of explanatory, organisational and descriptive levels of networks can be applied universally across biological sciences. To this end, this highly interdisciplinary theme issue focuses on the definition, motivation (...) and application of key concepts in biological network science, such as explanatory power of distinctively network explanations, network levels, and network hierarchies. (shrink)

ABSTRACT LeDoux's pioneering work on the neurobiology of fear has played a crucial role in informing debates in the philosophy of emotion. For example, it plays a key part in Griffiths’ argument for why emotions don’t form a natural kind. Likewise, it is employed by Faucher and Tappolet to defend pro-emotion views, which claim that emotions aid reasoning. LeDoux, however, now argues that his work has been misread. He argues that using emotion terms, like ‘fear’, to describe neurocognitive data adds (...) a ‘surplus meaning’: it attributes phenomenal properties to survival circuits which they don’t possess. This paper aims to explore LeDoux's new proposal, and examine the potentially devastating consequences that ensue for the aforementioned views. I end by addressing the worry that these lessons are conditional on LeDoux's own higher-order theory of emotional consciousness being true. (shrink)

There is a vast literature within philosophy of mind that focuses on artificial intelligence, but hardly mentions methodological questions. There is also a growing body of work in philosophy of science about modeling methodology that hardly mentions examples from cognitive science. Here these discussions are connected. Insights developed in the philosophy of science literature about the importance of idealization provide a way of understanding the neural implausibility of connectionist networks. Insights from neurocognitive science illuminate how relevant similarities between models and (...) targets are picked out, how modeling inferences are justified, and the metaphysical status of models. (shrink)

This paper examines the explanatory distinctness of wiring optimization models in neuroscience. Wiring optimization models aim to represent the organizational features of neural and brain systems as optimal (or near-optimal) solutions to wiring optimization problems. My claim is that that wiring optimization models provide design explanations. In particular, they support ideal interventions on the decision variables of the relevant design problem and assess the impact of such interventions on the viability of the target system.

Deep learning is currently the most prominent and widely successful method in artificial intelligence. Despite having played an active role in earlier artificial intelligence and neural network research, philosophers have been largely silent on this technology so far. This is remarkable, given that deep learning neural networks have blown past predicted upper limits on artificial intelligence performance—recognizing complex objects in natural photographs and defeating world champions in strategy games as complex as Go and chess—yet there remains no universally accepted explanation (...) as to why they work so well. This article provides an introduction to these networks as well as an opinionated guidebook on the philosophical significance of their structure and achievements. It argues that deep learning neural networks differ importantly in their structure and mathematical properties from the shallower neural networks that were the subject of so much philosophical reflection in the 1980s and 1990s. The article then explores several different explanations for their success and ends by proposing three areas of inquiry that would benefit from future engagement by philosophers of mind and science. (shrink)

Joint actions often require agents to track others’ actions while planning and executing physically incongruent actions of their own. Previous research has indicated that this can lead to visuomotor interference effects when it occurs outside of joint action. How is this avoided or overcome in joint actions? We hypothesized that when joint action partners represent their actions as interrelated components of a plan to bring about a joint action goal, each partner’s movements need not be represented in relation to distinct, (...) incongruent proximal goals. Instead they can be represented in relation to a single proximal goal – especially if the movements are, or appear to be, mechanically linked to a more distal joint action goal. To test this, we implemented a paradigm in which participants produced finger movements that were either congruent or incongruent with those of a virtual partner, and either with or without a joint action goal (the joint flipping of a switch, which turned on two light bulbs). Our findings provide partial support for the hypothesis that visuomotor interference effects can be reduced when two physically incongruent actions are represented as mechanically interdependent contributions to a joint action goal. (shrink)

Introduction: The objective of this investigation is to analyse the informational circuits of the brain connections with the body from neurologic and neuroscience point of view, on the basis of the concepts of information promoted by the Informational Model of Consciousness. Analysis: Distinguishing between the virtual and matter-related information promoted by the Informational Model of Consciousness, the main specific features of consciousness are analyzed from the informational perspective, showing that the informational architecture of consciousness consists in seven groups of specific (...) activities, defined as cognitive centres, each of them with specific distinct tasks, but correlated each other: centre of acquisition and storing of information (memory), centre of decision and command (decision), centre of the emotional states (emotions), centre of the body maintenance (power and health), centre of the genetic elaboration/transmission (reproduction) and the info-genetic generator, inherited from the parents (predispositions, talents and skills). A special centre, dedicated to the connectivity with some extra-power properties of the mind is also introduced, assuring an intimate supra-sensitive detection of the world to explain the associated phenomena of the near-death experiences. Result: The activity of all these centres should be supported neurologically by the brain neuro-connectivity to the body and to external and internal info-signals. On the basis of the informational analysis, the neuro-connections of the brain regions associated to the main characteristics of the cognitive centres are highlighted, showing the anatomic and neuro-functional relation between the distinct components of the brain and the specific operating body regions. These connections describe in terms of information the brain-body neuro-activities as informational specific circuits, composed by the info-operational subsystems managed by the brain, and sensors, transducer and execution elements. Conclusion: The components and connections mind-body stipulated by the Informational Model of Consciousness are supported by the neurologic/neuroscience evidence. (shrink)

Integrated information theory is a theory of consciousness that was originally formulated, and is standardly still expressed, in terms of controversial interpretations of its own ontological and epistemological basis. These form the orthodox interpretation of IIT. The orthodox epistemological interpretation is the axiomatic method, whereby IIT is ultimately derived from, justified by, and beholden to a set of phenomenological axioms. The orthodox ontological interpretation is panpsychism, according to which consciousness is fundamental, intrinsic, and pervasive. In this paper it is argued (...) that both components of the orthodox interpretation should be rejected. But IIT should not be rejected since an interpretation-neutral formulation is available. After explaining the neutral formulation, more plausible non-axiomatic epistemologies are defended. The neutral formulation is then shown to be consistent with various contemporary physicalist ontologies of consciousness, including the phenomenal concept strategy, representationalism, and even illusionism. Along the way, instructive connections between interpretations of IIT and interpretations of quantum mechanics are noted. (shrink)

La hipótesis del marcador somático (SMH) ha sido una de las teorías más influyentes en las neurociencias desde principios de los años 90s en que fue formulada por Antonio Damasio en su libro El error de Descartes (1994). Desde entonces, diversos estudios, a favor y en contra se han escrito, sin un veredicto. En este trabajo se propone una explicación abarcadora de lo que es la hipótesis del marcador somático. En segundo lugar, se hace una valoración sucinta del peso que (...) la amígdala pueda tener en el proceso de toma de decisiones inconscientes. En contraste, se citan algunos resultados que apuntan que la corteza prefrontal ventromedial estaría comprometida con nuestras decisiones racionales. Finalmente, se recuperan algunas críticas de otros investigadores a la hipótesis del marcador somático a partir de resultados mixtos obtenidos en el juego de azar y apuestas de Iowa. Se concluye que la mayor valía de la SMH es haber terminado con la dualidad cerebro-cuerpo, pero que la hipótesis por sí misma, no es suficiente para sostener que el proceso de toma de decisiones se realice principalmente a partir de lo que sentimos. El proceso de toma de decisiones, si bien se vale de respuestas inconscientes somatosensoriales, es un proceso físico-emocional-racional más complejo, que carece aún de suficientes evidencias para ser situado. The somatic marker hypothesis (SMH) has been one of the most influential theories in the neurosciences since the early 1990s, when it was formulated by Antonio Damasio in his book Descartes’ Error (1994). Since then, various studies, for and against, have been written without a verdict. Firstly, this study provides a comprehensive explanation of the SMH. Secondly, it provides a detailed assessment of the relevance of the amygdala in the process of making unconscious decisions. In contrast, we cite some results that suggest that the ventromedial prefrontal cortex would be involved in our rational decisions. Finally, we review some of the criticism of the SMH that was based on the mixed results obtained in the Iowa Gambling Task. We suggest that the main value of the SMH is that it resolves the brain-body duality problem. However, the hypothesis by itself is insufficient to claim that the decision-making process is mainly based on our feelings. Although the decision-making process uses unconscious somatosensory responses, it is a more complex physical-emotional-rational process, which still lacks sufficient evidence to be located. (shrink)